National Repository of Grey Literature 24 records found  1 - 10nextend  jump to record: Search took 0.01 seconds. 
Rekonstrukce metabolických drah bakterií Legionella polyplacis a Candidatus Riesia pediculischaeffi, symbiontů vší
ZADINOVÁ, Zuzana
The genomes of two bacteria, Legionella polyplacis and Candidatus Riesia pediculischaeffi, lice endosymbionts, were examined and compared. Preserved genes were identified, assigned to appropriate metabolic pathways, and listed in an electronic attachment table. Completeness and functionality were assessed for individual metabolic pathways. Based on the results, metabolic maps were created for both bacteria
Dýchání spermií ryb: druhová specifičnost a vliv teploty prostředí
RAHI, Deepali
The presented studies were designed to investigate the role of mitochondrial respiration, glycolysis, and fatty acid oxidation in the energy supply of spermatozoa in freshwater, externally fertilizing fish species possessing differences in sperm motility duration and spawning temperature. The first study conducted on Siberian sturgeon (Acipenser baerii, Acipenseriformes) revealed that mitochondrial respiration is essential for the energy supply of spermatozoa, while glycolysis and fatty acid oxidation have minor importance at both states - before and after attaining motility. Spermatozoon oxygen consumption rate (OCR) was higher than one detected for coldwater teleosts, such as trout, and lower than in marine species, for example, turbot. The presented study also revealed that sturgeons belong to the group of fishes whose spermatozoa possess the capacity to enhance oxidative metabolism after motility activation and uncoupling of oxidative phosphorylation (OXPHOS). In the second study conducted on spermatozoa of coldwater species burbot (Lota lota, Gadiformes), the functioning of the most important bioenergetic pathways (mitochondrial respiration, glycolysis, and fatty acid oxidation) was investigated at spawning temperature (4 °C) and maximum critical temperature (CTmax, 15 °C). At spawning temperature, similar to the results revealed for Siberian sturgeon spermatozoa, the role of glycolysis and fatty acid oxidation in energy supply was insignificant. Mitochondrial respiration was detectable at both quiescent and motile states, but no inhibition was observed after exposure of sperm to the respiratory inhibitor. Also, the OCR range was the lowest compared to the available data for OCR in teleost spermatozoa at motile or immotile state. Additionally, the OCR was not enhanced after motility activation or after treatment with an uncoupling agent. Contrastingly, at CTmax, the activity of OXPHOS became predominant. The OCR was enhanced, and that could be inhibited by using a respiratory inhibitor. Furthermore, to explore the long-lasting motility of sturgeon spermatozoa, succeeding steps were taken by studying the phosphocreatine-creatine (PCr-Cr) shuttle system apart from the previously studied pathways - OXPHOS, glycolysis, and fatty acid oxidation. The results obtained for sterlet (A. ruthenus, Acipenseriformes) revealed that PCr-Cr shuttle, known for maintaining a homogenous concentration of ATP molecules throughout the flagellar length, plays an active role while spermatozoa are at a quiescent state. No significant contribution of this shuttle in energy supply after sterlet sperm motility activation was detected. In addition to this, presented results also revealed that sturgeon spermatozoa, similar to carp and trout sperm, can be reactivated after the termination of the first motility period, and these secondly activated spermatozoa can successfully fertilize eggs. Moreover, for the first time, it was revealed that OXPHOS and PCr-Cr shuttle systems are the most crucial bioenergetic pathways during the sperm reactivation process. Overall, it was concluded that in the studied fish species, despite taxonomical differences or varying spawning temperature , sperm energy production and utilization strategy remained the same: most of the spermatozoon energy was derived from stored ATP that had been synthesized via OXPHOS during a quiescent but bioenergetically active state. Also, sturgeons are the group of fishes that possess an ability of sperm reactivation, with mitochondrial respiration and PCr-Cr shuttle system being the major contributing pathways for energy supply during reactivation process.
The role of nuclear-encoded subunits of cytochrome c oxidase in mitochondrial metabolism
Čunátová, Kristýna
Mitochondria, 'the powerhouses of the cell', house the integral metabolism pathway of oxidative phosphorylation to produce the majority of cellular energy. Mammalian cytochrome c oxidase, also called complex IV (cIV), is indispensable for the overall oxidative phosphorylation function as the terminal oxidase, and for its regulation to sustain energetic needs. Since cIV is a multimeric enzyme composed of subunits encoded by nuclear and mitochondrial genomes, its biogenesis is a complicated process, which needs to be coordinated to complete a fully functional complex. Further, the setup of individual nuclear-encoded subunits isoforms of cIV may fine-tune cIV function based on the tissue or the environment context. Despite the physiological and pathological relevance of cIV composition, biogenesis, and the secondary deficiencies triggered by cIV defects, nuclear-encoded subunits' function remains poorly understood. At first, mammalian COX4 subunit isoforms with tissue- and oxygen-dependent expression were studied in the HEK293 cellular model with an exclusive expression of COX4I1 or COX4I2 isoform. Remarkably, the COX4I2 isozyme showed lower affinity to oxygen, which may imply regulation of cIV activity under hypoxia, and is of physiological relevance for the oxygen-sensing mechanism. Further,...
The role of nuclear-encoded subunits of cytochrome c oxidase in mitochondrial metabolism
Čunátová, Kristýna ; Pecina, Petr (advisor) ; Gahura, Ondřej (referee) ; Ugalde, Cristina (referee)
Mitochondria, 'the powerhouses of the cell', house the integral metabolism pathway of oxidative phosphorylation to produce the majority of cellular energy. Mammalian cytochrome c oxidase, also called complex IV (cIV), is indispensable for the overall oxidative phosphorylation function as the terminal oxidase, and for its regulation to sustain energetic needs. Since cIV is a multimeric enzyme composed of subunits encoded by nuclear and mitochondrial genomes, its biogenesis is a complicated process, which needs to be coordinated to complete a fully functional complex. Further, the setup of individual nuclear-encoded subunits isoforms of cIV may fine-tune cIV function based on the tissue or the environment context. Despite the physiological and pathological relevance of cIV composition, biogenesis, and the secondary deficiencies triggered by cIV defects, nuclear-encoded subunits' function remains poorly understood. At first, mammalian COX4 subunit isoforms with tissue- and oxygen-dependent expression were studied in the HEK293 cellular model with an exclusive expression of COX4I1 or COX4I2 isoform. Remarkably, the COX4I2 isozyme showed lower affinity to oxygen, which may imply regulation of cIV activity under hypoxia, and is of physiological relevance for the oxygen-sensing mechanism. Further,...
The role of mitochondria in adaptation to chronic hypoxia in the spontaneously hypertensive and conplastic rats.
Weissová, Romana ; Kalous, Martin (advisor) ; Rauchová, Hana (referee)
Adaptation to chronic hypoxia provides cardioprotective effects. Molecular mechanism of this phenomenon is not yet completely understood, but it is known that cardiac mitochondria play an essential role in induction of protective effects. The purpose of this diploma thesis is to study effects of continuous normobaric hypoxia (CNH; 10 % O2, 21 days) on spontaneously hypertensive rats (SHR) and conplastic strain that is derived from SHR. These animals have nuclear genome of SHR strain and mitochondrial genome of Brown Norway (BN) strain. Cardiac homogenate was used to measure enzymatic activity of malate dehydrogenase (MDH), citrate synthase (CS), NADH-cytochrome c oxidoreductase, succinate-cytochrome c oxidoreductase and cytochrome oxidase (COX). Using Western blot procedure the protein amount of antioxidant enzymes was measured - manganese superoxide dismutase and copper-zinc superoxide dismutase (MnSOD, Cu/ZnSOD), catalase and chosen subunits of oxidative phosphorylation complexes (Ndufa9, Sdha, Uqcrc2, COX-4, MTCO1, Atp5a1). Under normoxic conditions the conplastic strain has lower amount of complex IV subunit MTCO1 in comparison with SHR. This subunit is encoded by mitochondrial DNA and it is one of the seven protein-coding genes in conplastic strain that differ from SHR. Adaptation to hypoxia causes an...
Mitochondrial ATP synthase deficiencies of a nuclear genetic origin
Karbanová, Vendula ; Houštěk, Josef (advisor) ; Kalous, Martin (referee) ; Rossmeisl, Martin (referee)
ATP synthase represents the key enzyme of cellular energy provision and ATP synthase disorders belong to the most deleterious mitochondrial diseases affecting pediatric population. The aim of this thesis was to identify nuclear genetic defects and describe the pathogenic mechanism of altered biosynthesis of ATP synthase that leads to isolated deficiency of this enzyme manifesting as an early onset mitochondrial encephalo-cardiomyopathy. Studies in the group of 25 patients enabled identification of two new disease-causing nuclear genes responsible for ATP synthase deficiency. The first affected gene was TMEM70 that encodes an unknown mitochondrial protein. This protein was identified as a novel assembly factor of ATP synthase, first one specific for higher eukaryotes. TMEM70 protein of 21 kDa is located in mitochondrial inner membrane and it is absent in patient tissues. TMEM70 mutation was found in 23 patients and turned to be the most frequent cause of ATP synthase deficiency. Cell culture studies also revealed that enzyme defect leads to compensatory-adaptive upregulation of respiratory chain complexes III and IV due to posttranscriptional events. The second affected gene was ATP5E that encodes small structural epsilon subunit of ATP synthase. Replacement of conserved Tyr12 with Cys caused...
The role of mitochondrial respiratory chain in invasiveness and metastasis of cancer cells and possible therapeutic interventions
Legátová, Anna ; Brábek, Jan (advisor) ; Truksa, Jaroslav (referee)
The mitochondrial respiratory chain, also called the electron transport chain (ETC), has a pivotal role in key features of cancer cells e.g., proliferation, the metabolic shift from oxidative phosphorylation (OXPHOS) to aerobic glycolysis, or the ability to form metastases. This review summarizes current knowledge about ETC and its relationship to cancer, especially to invasiveness and metastases formation. Firstly, it deals with a process called the Warburg effect and with metabolic complexity in the tumor microenvironment. Then it shows how OXPHOS activity affects invasiveness of cancer cells and metastases formation, and it points out the connection between invasiveness and increased levels of ETC-generated reactive oxygen species. At the end, the review deals with possible use of ETC inhibitors in anticancer therapy.
Effects of antidepressants and depressive disorders on mitochondrial functions
Hroudová, Jana ; Fišar, Zdeněk (advisor)
Mood disorders are serious diseases. Nevertheless, their pathophysiology is not sufficiently clarified. Biological markers that would facilitate the diagnosis or successful prediction of pharmacotherapy are still being sought. The aim of the study was to find out whether mitochondrial functions are affected by antidepressants, mood stabilizers and depression. Our research is based on recent hypotheses of mood disorders, the advanced monoamine hypothesis, the neurotrophic hypothesis, and the mitochondrial dysfunction hypothesis. We assume that impaired function of mitochondria leads to neuronal damage and can be related to the origin of mood disorders. Effects of antidepressants and mood stabilizers on mitochondrial functions can be related to their therapeutic or side effects. In vitro effects of pharmacologically different antidepressants and mood stabilizers on the activities of mitochondrial enzymes were measured in mitochondria isolated from pig brains (in vitro model). Activity of monoamine oxidase (MAO) isoforms was determined radiochemically, activities of other mitochondrial enzymes were measured spectrophotometrically. Overall activity of the system of oxidative phosphorylation was measured electrochemically using high- resolution respirometry. Methods were modified to measure the same...
Effects of antidepressants and depressive disorders on mitochondrial functions
Hroudová, Jana ; Fišar, Zdeněk (advisor) ; Martásek, Pavel (referee) ; Kuča, Kamil (referee)
Mood disorders are serious diseases. Nevertheless, their pathophysiology is not sufficiently clarified. Biological markers that would facilitate the diagnosis or successful prediction of pharmacotherapy are still being sought. The aim of the study was to find out whether mitochondrial functions are affected by antidepressants, mood stabilizers and depression. Our research is based on recent hypotheses of mood disorders, the advanced monoamine hypothesis, the neurotrophic hypothesis, and the mitochondrial dysfunction hypothesis. We assume that impaired function of mitochondria leads to neuronal damage and can be related to the origin of mood disorders. Effects of antidepressants and mood stabilizers on mitochondrial functions can be related to their therapeutic or side effects. In vitro effects of pharmacologically different antidepressants and mood stabilizers on the activities of mitochondrial enzymes were measured in mitochondria isolated from pig brains (in vitro model). Activity of monoamine oxidase (MAO) isoforms was determined radiochemically, activities of other mitochondrial enzymes were measured spectrophotometrically. Overall activity of the system of oxidative phosphorylation was measured electrochemically using high- resolution respirometry. Methods were modified to measure the same...
Structural and Functional Interactions of Mitochondrial ADP-Phosphorylating Apparatus
Nůsková, Hana ; Houštěk, Josef (advisor) ; Kolarov, Jordan (referee) ; Kuda, Ondřej (referee) ; Panicucci Zíková, Alena (referee)
The complexes of the oxidative phosphorylation (OXPHOS) system in the inner mitochondrial membrane are organised into structural and functional super-assemblies, so-called supercomplexes. This type of organisation enables substrate channelling and hence improves the overall OXPHOS efficiency. ATP synthase associates into dimers and higher oligomers. Within the supercomplex of ATP synthasome, it interacts with ADP/ATP translocase (ANT), which exchanges synthesised ATP for cytosolic ADP, and inorganic phosphate carrier (PiC), which imports phosphate into the mitochondrial matrix. The existence of this supercomplex is generally accepted. Experimental evidence is however still lacking. In this thesis, structural interactions between ATP synthase, ANT and PiC were studied in detail. In addition, the interdependence of their expression was examined either under physiological conditions in rat tissues or using model cell lines with ATP synthase deficiencies of different origin. Specifically, they included mutations in the nuclear genes ATP5E and TMEM70 that code for subunit ε and the ancillary factor of ATP synthase biogenesis TMEM70, respectively, and a microdeletion at the interface of genes MT-ATP6 and MT-COX3 that impairs the mitochondrial translation of both subunit a of ATP synthase and subunit Cox3...

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